STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEF1Penta-EF-hand domain containing 1. (157 aa)    
Predicted Functional Partners:
KLHL12
Kelch like family member 12.
    
 0.920
SEC31A
SEC31 homolog A, COPII coat complex component.
    
 0.861
FAM83B
Family with sequence similarity 83 member B.
      
 0.749
SEC31B
SEC31 homolog B, COPII coat complex component.
    
 
 0.650
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.598
HEBP2
Uncharacterized protein.
    
   0.597
ENSAPLP00000025388
BRO1 domain-containing protein.
    
 
 0.596
PDCD6IP
BRO1 domain-containing protein.
    
 
 0.596
ENSAPLP00000032537
Uncharacterized protein.
   
 0.568
KLHL3
Kelch like family member 3.
    
 0.519
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.