Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PEF1Penta-EF-hand domain containing 1. (157 aa)    
Predicted Functional Partners:
KLHL12
Kelch like family member 12.
    
 0.902
SEC31A
SEC31 homolog A, COPII coat complex component.
    
 0.833
SEC31B
SEC31 homolog B, COPII coat complex component.
    
 0.797
ENSAPLP00000025388
BRO1 domain-containing protein.
    
 
 0.735
PDCD6IP
BRO1 domain-containing protein.
    
 
 0.735
ANXA11
Annexin.
   
 
 0.722
HEBP2
Uncharacterized protein.
    
   0.699
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.672
ENSAPLP00000020642
DDHD domain-containing protein.
    
 
 0.599
SEC23IP
WWE domain-containing protein.
    
 
 0.599
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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