Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CDADC1Cytidine and dCMP deaminase domain containing 1. (487 aa)    
Predicted Functional Partners:
MORN5
MORN repeat containing 5.
      
 0.848
TYMS
Thymidylate synthetase.
  
 
 0.684
PHF11
PHD finger protein 11.
   
  
 0.672
TK1
Thymidine kinase.
  
 
 0.670
LLPH
LLP homolog, long-term synaptic facilitation factor.
      
 0.669
RCBTB1
RCC1 and BTB domain containing protein 1.
   
  
 0.653
NHLRC2
NHL repeat containing 2.
      
 0.650
RCBTB2
RCC1 and BTB domain containing protein 2.
   
  
 0.638
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
      
 0.626
ITM2B
Integral membrane protein 2B.
      
 0.622
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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