STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO4C1Solute carrier organic anion transporter family member. (682 aa)    
Predicted Functional Partners:
FAM174A
Family with sequence similarity 174 member A.
      
 0.705
ST8SIA4
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4; Belongs to the glycosyltransferase 29 family.
 
    
 0.634
SLC16A9
Solute carrier family 16 member 9.
   
 
 0.633
U3IXD8_ANAPP
SH2 domain-containing protein.
      
 0.624
RNF38
Ring finger protein 38.
   
  
 0.620
LIX1
Limb and CNS expressed 1.
   
  
 0.620
LNPEP
Leucyl and cystinyl aminopeptidase.
      
 0.611
SLC34A1
Solute carrier family 34 member 1.
      
 0.603
SLC16A12
Solute carrier family 16 member 12.
   
 
 0.591
SLC22A7
Solute carrier family 22 member 7.
   
  
 0.589
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.