Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SLCO4C1Solute carrier organic anion transporter family member. (682 aa)    
Predicted Functional Partners:
ST8SIA4
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4; Belongs to the glycosyltransferase 29 family.
      
 0.544
ENSAPLP00000027413
Uncharacterized protein.
   
 
 0.493
FAM174A
Family with sequence similarity 174 member A.
      
 0.485
U3IXD8_ANAPP
SH2 domain-containing protein.
      
 0.485
SLCO3A1
Solute carrier organic anion transporter family member.
      
 0.466
RNF38
Ring finger protein 38.
   
  
 0.450
LNPEP
Leucyl and cystinyl aminopeptidase.
      
 0.438
LIX1
Limb and CNS expressed 1.
   
  
 0.431
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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