Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CFAP57Cilia and flagella associated protein 57. (1239 aa)    
Predicted Functional Partners:
CFAP43
Cilia and flagella associated protein 43.
   
 
 0.900
CCDC39
Coiled-coil domain containing 39.
   
 0.809
ENSAPLP00000019915
Uncharacterized protein.
   
 0.801
ENSAPLP00000023338
Uncharacterized protein.
   
 0.801
ZMYND12
Zinc finger MYND-type containing 12.
   
 
 0.771
CCDC65
Coiled-coil domain containing 65.
   
 
 0.745
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.728
SAXO1
Stabilizer of axonemal microtubules 1.
   
 0.713
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.699
AK7
Adenylate kinase 7.
   
   0.694
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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