STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUM1Pumilio RNA binding family member 1. (1188 aa)    
Predicted Functional Partners:
CLINT1
Clathrin interactor 1.
   
 
 0.900
GAK
Cyclin G associated kinase.
   
 0.880
NANOS1
Nanos C2HC-type zinc finger 1; Belongs to the nanos family.
   
 
 0.724
NANOS3
Nanos C2HC-type zinc finger 3; Belongs to the nanos family.
   
 
 0.716
MRPL19
Mitochondrial ribosomal protein L19.
    
 
 0.684
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.658
ENSAPLP00000017407
Nanos-type domain-containing protein; Belongs to the nanos family.
   
 
 0.654
CNOT8
CCR4-NOT transcription complex subunit 8.
    
 
 0.653
ASB6
Ankyrin repeat and SOCS box containing 6.
    
 0.633
ENSAPLP00000018918
Death domain-containing protein.
   
 
 0.611
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.