STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11orf49Chromosome 11 open reading frame 49. (220 aa)    
Predicted Functional Partners:
ENSAPLP00000021267
Uncharacterized protein.
 
      0.899
LRRC49
Leucine rich repeat containing 49.
    
 
 0.893
TPGS1
Tubulin polyglutamylase complex subunit 1.
    
 
 0.893
TTLL1
Tubulin tyrosine ligase like 1.
    
 
 0.866
TBC1D19
TBC1 domain family member 19.
   
   0.818
TPGS2
Tubulin polyglutamylase complex subunit 2.
    
   0.816
KIAA1841
KIAA1841.
    
   0.816
EIF3F
Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
   0.760
RAB29
RAB29, member RAS oncogene family.
    
   0.598
C12orf10
Chromosome 12 open reading frame 10.
      
 0.547
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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