UBL7 protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

UBL7

Ubiquitin like 7. (380 aa)

Predicted Functional Partners:

MYSM1

0.955

UBXN7

0.922

NBR1

0.908

UBE2V1

0.898

ENSAPLP00000025536

0.883

ENSAPLP00000020757

0.881

ENSAPLP00000024521

0.881

ENSAPLP00000028453

0.881

ENSAPLP00000028515

0.881

ITSN2

0.881

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPLP00000020757	ENSAPLP00000024521	ENSAPLP00000020757	ENSAPLP00000024521	Uncharacterized protein.	EH domain-containing protein.	0.925
ENSAPLP00000020757	ENSAPLP00000028453	ENSAPLP00000020757	ENSAPLP00000028453	Uncharacterized protein.	annotation not available	0.925
ENSAPLP00000020757	ENSAPLP00000028515	ENSAPLP00000020757	ENSAPLP00000028515	Uncharacterized protein.	Uncharacterized protein.	0.926
ENSAPLP00000020757	ITSN2	ENSAPLP00000020757	ENSAPLP00000030081	Uncharacterized protein.	Uncharacterized protein.	0.926
ENSAPLP00000020757	UBL7	ENSAPLP00000020757	ENSAPLP00000009173	Uncharacterized protein.	Ubiquitin like 7.	0.881
ENSAPLP00000024521	ENSAPLP00000020757	ENSAPLP00000024521	ENSAPLP00000020757	EH domain-containing protein.	Uncharacterized protein.	0.925
ENSAPLP00000024521	ENSAPLP00000028453	ENSAPLP00000024521	ENSAPLP00000028453	EH domain-containing protein.	annotation not available	0.925
ENSAPLP00000024521	ENSAPLP00000028515	ENSAPLP00000024521	ENSAPLP00000028515	EH domain-containing protein.	Uncharacterized protein.	0.956
ENSAPLP00000024521	ITSN2	ENSAPLP00000024521	ENSAPLP00000030081	EH domain-containing protein.	Uncharacterized protein.	0.940
ENSAPLP00000024521	UBL7	ENSAPLP00000024521	ENSAPLP00000009173	EH domain-containing protein.	Ubiquitin like 7.	0.881
ENSAPLP00000025536	MYSM1	ENSAPLP00000025536	ENSAPLP00000005702	Ubiquitin-like domain-containing protein.	Myb like, SWIRM and MPN domains 1.	0.959
ENSAPLP00000025536	NBR1	ENSAPLP00000025536	ENSAPLP00000025901	Ubiquitin-like domain-containing protein.	NBR1 autophagy cargo receptor.	0.984
ENSAPLP00000025536	UBE2V1	ENSAPLP00000025536	ENSAPLP00000021756	Ubiquitin-like domain-containing protein.	Ubiquitin conjugating enzyme E2 V1.	0.996
ENSAPLP00000025536	UBL7	ENSAPLP00000025536	ENSAPLP00000009173	Ubiquitin-like domain-containing protein.	Ubiquitin like 7.	0.883
ENSAPLP00000025536	UBXN7	ENSAPLP00000025536	ENSAPLP00000024434	Ubiquitin-like domain-containing protein.	UBX domain-containing protein 7.	0.923
ENSAPLP00000028453	ENSAPLP00000020757	ENSAPLP00000028453	ENSAPLP00000020757	annotation not available	Uncharacterized protein.	0.925
ENSAPLP00000028453	ENSAPLP00000024521	ENSAPLP00000028453	ENSAPLP00000024521	annotation not available	EH domain-containing protein.	0.925
ENSAPLP00000028453	ENSAPLP00000028515	ENSAPLP00000028453	ENSAPLP00000028515	annotation not available	Uncharacterized protein.	0.956
ENSAPLP00000028453	ITSN2	ENSAPLP00000028453	ENSAPLP00000030081	annotation not available	Uncharacterized protein.	0.940
ENSAPLP00000028453	UBL7	ENSAPLP00000028453	ENSAPLP00000009173	annotation not available	Ubiquitin like 7.	0.881