STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEPACAM2HEPACAM family member 2. (464 aa)    
Predicted Functional Partners:
VPS50
VPS50 subunit of EARP/GARPII complex.
 
    
 0.769
UBXN2B
UBX domain protein 2B.
    
 0.657
TAF5L
TATA-box binding protein associated factor 5 like.
    
 0.631
NSMAF
Neutral sphingomyelinase activation associated factor.
    
 
 0.613
FAM110B
Family with sequence similarity 110 member B.
      
 0.611
C1GALT1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.
   
 
 0.610
BET1
t-SNARE coiled-coil homology domain-containing protein.
     
 0.608
GPR85
G protein-coupled receptor 85.
     
 0.587
U3I357_ANAPP
SAM domain-containing protein.
 
  
  0.573
ASB4
Ankyrin repeat and SOCS box containing 4.
      
 0.555
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.