STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMC2COX assembly mitochondrial protein. (75 aa)    
Predicted Functional Partners:
DLGAP5
DLG associated protein 5.
      
 0.871
CMC4
C-X9-C motif containing 4.
     
 0.865
BEND2
Uncharacterized protein.
      
 0.828
NEK4
NIMA related kinase 4; Belongs to the protein kinase superfamily.
      
 0.761
RRBP1
Ribosome binding protein 1.
      
 0.666
PRDM15
PR/SET domain 15.
      
 0.661
COX19
Cytochrome c oxidase assembly factor COX19.
     
 0.634
COA6
Cytochrome c oxidase assembly factor 6.
   
 
 0.627
PUM1
Pumilio RNA binding family member 1.
    
   0.623
PUM2
Pumilio RNA binding family member 2.
    
   0.623
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.