STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WACWW domain containing adaptor with coiled-coil. (647 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5 like.
   
 
 0.942
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.916
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
    
 
 0.900
RNF20
E3 ubiquitin protein ligase.
   
 0.858
RBM25
RNA binding motif protein 25.
   
 
 0.856
ENSAPLP00000025359
PWI domain-containing protein.
   
 
 0.856
SF3B3
Splicing factor 3b subunit 3.
    
 
 0.853
DDX46
DEAD-box helicase 46.
   
 
 0.825
SNRPD1
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 
 0.809
PRPF39
Pre-mRNA processing factor 39.
    
 
 0.806
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.