Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KLF2Uncharacterized protein. (380 aa)    
Predicted Functional Partners:
SOX1
SRY-box transcription factor 1.
    
 0.533
WFIKKN1
WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1.
    
 
 0.491
LIN28A
Lin-28 homolog A.
    
 0.490
RPRM
Reprimo, TP53 dependent G2 arrest mediator homolog.
      
 0.483
FOXO1
Forkhead box O1.
    
 0.466
U3J2G2_ANAPP
Homeobox domain-containing protein.
    
 0.453
U3I3F9_ANAPP
POU domain protein.
    
 0.452
GATA6
GATA binding protein 6.
    
 0.424
GATA3
GATA binding protein 3.
    
 0.413
CREBBP
CREB binding protein.
    
 0.410
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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