STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX37DEAH-box helicase 37. (1144 aa)    
Predicted Functional Partners:
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
   
 0.986
DDX52
Uncharacterized protein.
   
 0.986
UTP20
UTP20 small subunit processome component.
   
 0.982
UTP3
UTP3 small subunit processome component.
   
 0.982
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.981
FCF1
FCF1 rRNA-processing protein.
   
 0.978
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
   
 0.977
NOP14
NOP14 nucleolar protein.
   
 0.977
DCAF13
DDB1 and CUL4 associated factor 13.
   
 0.977
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.976
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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