STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSKH1Protein serine kinase H1; Belongs to the protein kinase superfamily. (420 aa)    
Predicted Functional Partners:
ENSAPLP00000026426
Protein kinase domain-containing protein.
 
  
   0.900
DCX
Doublecortin.
 
  
 
 0.872
ENSAPLP00000021962
Uncharacterized protein.
 
  
  0.728
ENSAPLP00000023276
Uncharacterized protein.
 
  
  0.716
MPP1
Membrane palmitoylated protein 1; Belongs to the MAGUK family.
 
 
  0.622
PPP4R3B
SMK-1 domain-containing protein.
      
 0.603
EDC4
Enhancer of mRNA decapping 4.
   
  
 0.593
RIPOR1
RHO family interacting cell polarization regulator 1.
      
 0.589
LCAT
Lecithin-cholesterol acyltransferase.
      
 0.586
U3I8C3_ANAPP
Tudor domain-containing protein.
     
 0.547
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.