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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATMINATM interactor. (796 aa)    
Predicted Functional Partners:
WRNIP1
WRN helicase interacting protein 1.
    
 
 0.698
CENPN
Centromere protein N.
 
   
 0.682
ATM
Non-specific serine/threonine protein kinase.
    
 0.653
ENSAPLP00000025323
Uncharacterized protein.
    
 0.641
DENND5B
DENN domain containing 5B.
      
 0.618
FRMPD4
FERM and PDZ domain containing 4.
      
 0.611
FGFR1OP
FGFR1 oncogene partner.
      
 0.611
DLGAP3
DLG associated protein 3.
      
 0.611
SIPA1L1
Signal induced proliferation associated 1 like 1.
      
 0.611
CDC42BPA
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
    
 0.549
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.