Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC1A4Solute carrier family 1 member 4. (610 aa)    
Predicted Functional Partners:
SLC38A4
Solute carrier family 38 member 4.
   
  
 0.820
SLC7A5
Solute carrier family 7 member 5.
   
 
 0.816
SLC3A1
Solute carrier family 3 member 1.
   
 
 0.688
SLC7A2
Solute carrier family 7 member 2.
   
 
 0.688
SLC7A1
Solute carrier family 7 member 1.
   
 
 0.680
MTR
5-methyltetrahydrofolate-homocysteine methyltransferase.
     
 0.662
SLC6A15
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
     
 0.660
SLC7A9
Solute carrier family 7 member 9.
   
 
 0.658
RHOH
Ras homolog family member H.
    
 0.648
NUDCD1
NudC domain containing 1.
    
   0.646
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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