Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL45Mitochondrial ribosomal protein L45. (349 aa)    
Predicted Functional Partners:
MRPL37
Mitochondrial ribosomal protein L37.
   
 
 0.972
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.956
MRPL39
Mitochondrial ribosomal protein L39.
   
 
 0.954
MRPL50
Mitochondrial ribosomal protein L50.
   
 
 0.944
MRPS30
Mitochondrial ribosomal protein S30.
   
 
 0.940
MRPL15
Mitochondrial ribosomal protein L15.
   
   0.930
ENSAPLP00000032586
Uncharacterized protein.
   
 
 0.929
MRPL48
Mitochondrial ribosomal protein L48.
   
 
 0.928
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.915
MRPL28
Mitochondrial ribosomal protein L28.
   
   0.914
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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