STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIEPeptidylprolyl isomerase E. (447 aa)    
Predicted Functional Partners:
PRPF19
Pre-mRNA processing factor 19.
    
 0.997
AQR
Aquarius intron-binding spliceosomal factor.
    
 0.988
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.982
BUD31
BUD31 homolog.
   
 0.981
SNW1
SNW domain containing 1.
   
 0.980
RBM22
RNA binding motif protein 22.
   
 0.978
ISY1
Uncharacterized protein.
   
  0.975
ZNF830
Zinc finger protein 830.
    
 0.969
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.926
PLRG1
Pleiotropic regulator 1.
    
 0.891
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.