STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETF1Eukaryotic translation termination factor 1. (404 aa)    
Predicted Functional Partners:
JMJD4
Jumonji domain containing 4.
    
 0.985
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.984
ENSAPLP00000026775
PAM2 domain-containing protein.
   
 0.980
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.977
UPF1
UPF1 RNA helicase and ATPase.
   
 0.942
U3J0G9_ANAPP
Uncharacterized protein.
   
 0.899
RPL8
Ribosomal protein L8.
   
 0.888
RPS23
Ribosomal protein S23.
  
 0.882
RPL12
Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
  
  0.874
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 0.873
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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