Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPN2Calpain 2; Belongs to the peptidase C2 family. (700 aa)    
Predicted Functional Partners:
TLN1
Talin 1.
   
 0.935
TLN2
Talin 2.
   
 0.934
ENSAPLP00000032537
Uncharacterized protein.
   
 0.911
BID
BH3-interacting domain death agonist; Counters the protective effect of Bcl-2.
    
  0.906
BAK1
BCL2 antagonist/killer 1.
   
 
 0.904
CAPN11
Uncharacterized protein; Belongs to the peptidase C2 family.
  
  
0.903
CAPNS2
Calpain small subunit 2.
   
0.855
GZMM
Granzyme M; Belongs to the peptidase S1 family.
   
 0.595
TMPRSS9
Transmembrane serine protease 9; Belongs to the peptidase S1 family.
    
 0.491
CASP9
Caspase 9; Belongs to the peptidase C14A family.
    
 0.462
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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