Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNA1Cyclin A1; Belongs to the cyclin family. (339 aa)    
Predicted Functional Partners:
CDK1
Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.
   
 0.999
FZR1
Fizzy and cell division cycle 20 related 1.
   
 0.999
CDK3
Cyclin dependent kinase 3; Belongs to the protein kinase superfamily.
   
 0.998
E2F1
E2F transcription factor 1.
   
 0.993
CCNA2
Cyclin A2; Belongs to the cyclin family.
  
 
0.992
RB1
RB transcriptional corepressor 1.
   
 0.992
CDKN1A
Cyclin dependent kinase inhibitor 1A.
   
 0.981
CDKN1A-2
Uncharacterized protein.
   
 0.981
CDKN1C
Uncharacterized protein.
   
 0.976
CDKN1B
Cyclin dependent kinase inhibitor 1B.
   
 0.976
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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