STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAZ1ABromodomain adjacent to zinc finger domain 1A. (1544 aa)    
Predicted Functional Partners:
CHRAC1
Chromatin accessibility complex subunit 1.
   
 0.992
POLE3
CBFD_NFYB_HMF domain-containing protein.
    
 0.971
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
   
 0.933
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.933
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
   
0.862
ENSAPLP00000028245
Uncharacterized protein.
    
 0.838
CECR2
CECR2 histone acetyl-lysine reader.
   
0.817
BPTF
Bromodomain PHD finger transcription factor.
   
 
0.675
U3I908_ANAPP
Uncharacterized protein.
      
 0.665
HELLS
Helicase, lymphoid specific.
   
 0.649
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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