STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IQM4_ANAPPUncharacterized protein. (676 aa)    
Predicted Functional Partners:
ENSAPLP00000028245
Uncharacterized protein.
    
 0.655
CDK9
Cyclin dependent kinase 9.
    
 
 0.603
JMJD6
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
    
 
 0.575
TAF7
TATA-box binding protein associated factor 7.
    
 
 0.562
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 
 0.551
ASXL3
Uncharacterized protein.
   
 0.547
E2F1
E2F transcription factor 1.
    
 
 0.537
YEATS4
YEATS domain containing 4.
    
 
 0.523
TRIP12
Thyroid hormone receptor interactor 12.
    
   0.516
TAF1
Transcription initiation factor TFIID subunit.
    
 
 0.515
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.