STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNASE1L3Deoxyribonuclease; Belongs to the DNase I family. (307 aa)    
Predicted Functional Partners:
SPCS2
Signal peptidase complex subunit 2.
    
 
 0.834
SPCS1
Signal peptidase complex subunit 1.
    
   0.825
ENSAPLP00000030221
WH2 domain-containing protein.
    
   0.563
S100A13
S100 calcium binding protein A13; Belongs to the S-100 family.
      
 0.547
SPARCL1
SPARC like 1.
      
 0.547
PRR5
Proline rich 5.
      
 0.545
SLC25A21
Solute carrier family 25 member 21; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.544
TBX20
Uncharacterized protein.
    
   0.538
INKA2
Inka box actin regulator 2.
    
   0.518
CLEC14A
C-type lectin domain containing 14A.
   
 
 0.508
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.