Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LRP4LDL receptor related protein 4. (1844 aa)    
Predicted Functional Partners:
MUSK
Muscle associated receptor tyrosine kinase.
   
 0.904
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
    
 0.890
AGRN
Agrin.
    
 0.823
DAB2
DAB adaptor protein 2.
    
 0.724
LRPAP1
LDL receptor related protein associated protein 1.
    
 
 0.707
CUBN
Cubilin.
   
 0.666
SOST
Sclerostin.
    
 0.659
CHRND
Cholinergic receptor nicotinic delta subunit.
     
 0.644
ANKRA2
Ankyrin repeat family A member 2.
    
 0.644
PCSK9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
    
 0.623
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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