Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
PUDPPseudouridine 5'-phosphatase. (294 aa)    
Predicted Functional Partners:
PGGHG
Protein-glucosylgalactosylhydroxylysine glucosidase.
  
 
 0.859
PNPLA4
Patatin like phospholipase domain containing 4.
      
 0.849
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.845
PGM3
Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, a sugar nucleotide critical to multiple glycosylation pathways including protein N- and O- glycosylation; Belongs to the phosphohexose mutase family.
   
 0.843
AGXT
Serine--pyruvate aminotransferase.
    
 0.838
YIPF6
Protein YIPF.
    
 0.784
ADHFE1
Fe-ADH domain-containing protein.
    
 0.761
EIF2S3
Tr-type G domain-containing protein.
   
  
 0.748
MPI
Mannose-6-phosphate isomerase.
    
 0.727
CPPED1
Metallophos domain-containing protein.
  
  
 0.700
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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