Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TPPPTubulin polymerization promoting protein. (276 aa)    
Predicted Functional Partners:
SNCA
Alpha-synuclein; Belongs to the synuclein family.
   
 
 0.878
GPNMB
Glycoprotein nmb.
      
 0.610
DCX
Doublecortin.
      
 0.596
SNCG
Gamma-synuclein; Belongs to the synuclein family.
   
 
 0.573
DUSP13
Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
   
  
 0.486
ENSAPLP00000025413
Uncharacterized protein.
   
  
 0.486
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
    
 
 0.483
MAP1LC3B
Uncharacterized protein.
    
 
 0.483
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
      
 0.445
SH3BGRL3
SH3 domain-binding glutamic acid-rich-like protein; Belongs to the SH3BGR family.
      
 0.431
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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