STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP6La ribonucleoprotein domain family member 6. (465 aa)    
Predicted Functional Partners:
LRMP
Lymphoid restricted membrane protein.
      
 0.632
RPS25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
      
 0.631
MCEE
Methylmalonyl-CoA epimerase.
      
 0.611
TM2D3
TM2 domain containing 3.
      
 0.611
DNAAF2
Protein kintoun; Required for cytoplasmic pre-assembly of axonemal dyneins, thereby playing a central role in motility in cilia and flagella. Involved in pre-assembly of dynein arm complexes in the cytoplasm before intraflagellar transport loads them for the ciliary compartment. Belongs to the PIH1 family. Kintoun subfamily.
      
 0.602
ADAD1
Adenosine deaminase domain containing 1.
      
 0.547
PLCXD1
Phosphatidylinositol specific phospholipase C X domain containing 1.
      
 0.539
STRAP
Serine/threonine kinase receptor associated protein.
    
 
 0.524
ESRP2
Epithelial splicing regulatory protein 2.
      
 0.488
APCDD1
APC down-regulated 1.
      
 0.483
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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