STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN54Lin-54 DREAM MuvB core complex component. (663 aa)    
Predicted Functional Partners:
LIN52
Lin-52 DREAM MuvB core complex component.
    
 0.951
LIN9
Lin-9 DREAM MuvB core complex component.
   
 0.933
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.914
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.820
WDR73
Uncharacterized protein.
   
 0.736
RBL2
RB transcriptional corepressor like 2.
   
 0.734
RBL1
RB transcriptional corepressor like 1.
   
 0.734
E2F4
E2F_TDP domain-containing protein.
   
 0.716
E2F5
E2F transcription factor 5.
   
 0.713
TFDP1
Transcription factor.
   
 0.679
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.