STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD12Sterile alpha motif domain containing 12. (197 aa)    
Predicted Functional Partners:
YEATS2
Uncharacterized protein.
   
  
 0.566
RAPGEF2
Rap guanine nucleotide exchange factor 2.
      
 0.493
SAMD10
Uncharacterized protein.
 
      0.480
LRRC9
Uncharacterized protein.
      
 0.475
USH1C
USH1 protein network component harmonin.
      
 0.439
STARD7
StAR related lipid transfer domain containing 7.
      
 0.424
ENSAPLP00000016370
Uncharacterized protein.
      
 0.424
U3IIV7_ANAPP
Uncharacterized protein.
    
 0.416
U3IK86_ANAPP
PH domain-containing protein.
    
 0.416
IPCEF1
PH domain-containing protein.
    
 0.416
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.