STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEPSECSSep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase. (540 aa)    
Predicted Functional Partners:
PSTK
Phosphoseryl-tRNA kinase.
     
 0.992
SEPHS1
Selenophosphate synthetase 1.
     
 0.978
CCDC149
Coiled-coil domain containing 149.
      
 0.781
BOD1L1
Biorientation of chromosomes in cell division 1 like 1.
      
 0.781
SECISBP2
SECIS binding protein 2.
      
 0.749
LGI2
Leucine rich repeat LGI family member 2.
 
    
 0.738
ZCCHC4
Zinc finger CCHC-type containing 4.
   
  
 0.683
DHX15
DEAH-box helicase 15.
      
 0.680
SLC34A2
Solute carrier family 34 member 2.
      
 0.641
SARS1
Seryl-tRNA synthetase.
     
 0.627
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.