STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC40Leucine rich repeat containing 40. (602 aa)    
Predicted Functional Partners:
CNPY3
Canopy FGF signaling regulator 3.
    
 0.910
KCTD3
Potassium channel tetramerization domain containing 3.
    
  0.769
SMIM12
Small integral membrane protein 12.
   
 
 0.749
SPEF2
Sperm flagellar 2.
    
 0.671
WLS
Wnt ligand secretion mediator.
      
 0.667
TCAIM
T cell activation inhibitor, mitochondrial.
   
  
 0.659
BEND7
BEN domain-containing protein.
      
 0.646
BTBD8
BTB domain containing 8.
    
 
 0.643
NAIF1
Nuclear apoptosis inducing factor 1.
      
 0.641
ENSAPLP00000021469
Uncharacterized protein.
      
 0.641
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.