STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC40Leucine rich repeat containing 40. (602 aa)    
Predicted Functional Partners:
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
  
 0.751
KCTD19
Potassium channel tetramerization domain containing 19.
    
 0.661
DLG3
Discs large MAGUK scaffold protein 3.
    
 0.652
MYL4
Uncharacterized protein.
   
 0.638
EHBP1
EH domain binding protein 1.
    
 0.620
EPB41L5
Erythrocyte membrane protein band 4.1 like 5.
      
 0.611
LLGL2
LLGL scribble cell polarity complex component 2.
      
 0.610
ENSAPLP00000018608
Uncharacterized protein.
   
  
 0.599
CLIP1
CAP-Gly domain containing linker protein 1.
      
 0.598
ADGRL2
Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.
    
   0.598
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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