STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDH1Malate dehydrogenase. (334 aa)    
Predicted Functional Partners:
MDH2
Malate dehydrogenase.
   
 0.979
FH
Fumarate hydratase.
  
 0.977
GOT2
Aspartate aminotransferase.
   
 0.976
GOT1
Aspartate aminotransferase.
   
 0.973
ACLY
Ligase_CoA domain-containing protein.
  
 0.969
PCK1
Phosphoenolpyruvate carboxykinase 1.
  
 
 0.959
ME3
Malic enzyme.
  
 0.958
ME1
Malic enzyme.
  
 0.952
ME2
Malic enzyme.
  
 0.949
ADSL
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 0.897
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.