STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4ASemaphorin 4A; Belongs to the semaphorin family. (701 aa)    
Predicted Functional Partners:
PLXND1
Plexin D1.
    
 0.990
RND2
Rho family GTPase 2.
    
 0.720
PLXNB1
Plexin B1.
    
 0.715
RND3
Rho family GTPase 3.
    
 0.640
MMP24
Matrix metallopeptidase 24.
      
 0.595
PLXNA4
Plexin A4.
    
 0.568
PLXNA2
Plexin A2.
    
 0.568
PLXNA1
Plexin_cytopl domain-containing protein.
    
 0.568
PLXNC1
Plexin C1.
    
 0.566
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
      
 0.559
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.