Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL39Mitochondrial ribosomal protein L39. (384 aa)    
Predicted Functional Partners:
MRPL1
Mitochondrial ribosomal protein L1.
   
 
 0.975
MRPL32
Mitochondrial ribosomal protein L32.
  
 
 0.968
MRPL3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.967
MRPL44
Mitochondrial ribosomal protein L44.
  
 
 0.966
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.963
ENSAPLP00000030457
Ribosomal_L16 domain-containing protein.
   
 
 0.959
MRPL15
Mitochondrial ribosomal protein L15.
   
 
 0.958
MRPL13
Mitochondrial ribosomal protein L13.
  
 
 0.958
MRPL50
Mitochondrial ribosomal protein L50.
   
 
 0.956
MRPL37
Mitochondrial ribosomal protein L37.
   
 
 0.955
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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