Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PPEF1Serine/threonine-protein phosphatase with EF-hands. (667 aa)    
Predicted Functional Partners:
RHO
Rhodopsin.
   
 0.636
U3ICB9_ANAPP
Rhodopsin.
   
 0.636
CCNG2
Cyclin G2; Belongs to the cyclin family.
    
 0.618
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 
 0.602
ASB12
Ankyrin repeat and SOCS box containing 12.
    
 0.591
CDCP1
CUB domain containing protein 1.
      
 0.564
EFCAB2
EF-hand calcium binding domain 2.
    
 0.559
CABP4
Calcium binding protein 4.
    
 0.558
NUP54
Nucleoporin 54.
      
 0.554
GUCA1B
Guanylate cyclase activator 1B.
   
 0.548
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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