STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALHM1Calcium homeostasis modulator 1. (342 aa)    
Predicted Functional Partners:
TRPM5
Transient receptor potential cation channel subfamily M member 5; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.699
CALHM3
Calcium homeostasis modulator 3.
     
 0.686
PANX1
Pannexin; Structural component of the gap junctions and the hemichannels.
      
 0.643
MYADML2
Myeloid associated differentiation marker like 2.
      
 0.639
OTOP1
Otopetrin 1.
   
  
 0.611
ANO6
Anoctamin.
      
 0.604
PANX2
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
      
 0.583
TSPO
Translocator protein.
      
 0.583
IQCA1
IQ motif containing with AAA domain 1.
      
 0.550
TRPM8
Transient receptor potential cation channel subfamily M member 8.
      
 0.547
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.