STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RGSL1Regulator of G protein signaling like 1. (911 aa)    
Predicted Functional Partners:
MRE11
MRE11 homolog, double strand break repair nuclease.
    
   0.583
FBXO44
Uncharacterized protein.
      
 0.577
PIGV
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 
 0.550
PIGL
Phosphatidylinositol glycan anchor biosynthesis class L.
     
 0.539
PIGC
Phosphatidylinositol glycan anchor biosynthesis class C.
    
 
 0.471
PIGZ
Mannosyltransferase.
    
 
 0.471
PIGH
Phosphatidylinositol glycan anchor biosynthesis class H.
    
 
 0.468
ENSAPLP00000017001
Uncharacterized protein.
      
 0.467
PIGK
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
      
 0.467
PIGO
Phosphatidylinositol glycan anchor biosynthesis class O.
      
 0.461
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.