U3IRC4_ANAPP protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

U3IRC4_ANAPP

Uncharacterized protein. (881 aa)

Predicted Functional Partners:

RPUSD2

0.770

PPP2CA

0.720

PPP2CB

0.720

ASB3

0.715

POLR3A

0.687

PNO1

0.687

ENSAPLP00000018477

0.660

ENSAPLP00000017036

0.651

PTPA

0.632

PPP2R2A

0.621

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASB3	PNO1	ENSAPLP00000010018	ENSAPLP00000025611	Ankyrin repeat and SOCS box containing 3.	Partner of NOB1 homolog.	0.669
ASB3	POLR3A	ENSAPLP00000010018	ENSAPLP00000015825	Ankyrin repeat and SOCS box containing 3.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.572
ASB3	RPUSD2	ENSAPLP00000010018	ENSAPLP00000004243	Ankyrin repeat and SOCS box containing 3.	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	0.716
ASB3	U3IRC4_ANAPP	ENSAPLP00000010018	ENSAPLP00000009797	Ankyrin repeat and SOCS box containing 3.	Uncharacterized protein.	0.715
ENSAPLP00000017036	PPP2CA	ENSAPLP00000017036	ENSAPLP00000014715	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.604
ENSAPLP00000017036	PPP2CB	ENSAPLP00000017036	ENSAPLP00000026684	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.604
ENSAPLP00000017036	PPP2R2A	ENSAPLP00000017036	ENSAPLP00000008544	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.714
ENSAPLP00000017036	PTPA	ENSAPLP00000017036	ENSAPLP00000007448	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.	0.788
ENSAPLP00000017036	U3IRC4_ANAPP	ENSAPLP00000017036	ENSAPLP00000009797	Uncharacterized protein.	Uncharacterized protein.	0.651
ENSAPLP00000018477	PPP2CA	ENSAPLP00000018477	ENSAPLP00000014715	Metallophos domain-containing protein.	Serine/threonine-protein phosphatase.	0.695
ENSAPLP00000018477	PPP2CB	ENSAPLP00000018477	ENSAPLP00000026684	Metallophos domain-containing protein.	Serine/threonine-protein phosphatase.	0.695
ENSAPLP00000018477	PPP2R2A	ENSAPLP00000018477	ENSAPLP00000008544	Metallophos domain-containing protein.	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.757
ENSAPLP00000018477	PTPA	ENSAPLP00000018477	ENSAPLP00000007448	Metallophos domain-containing protein.	Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.	0.874
ENSAPLP00000018477	U3IRC4_ANAPP	ENSAPLP00000018477	ENSAPLP00000009797	Metallophos domain-containing protein.	Uncharacterized protein.	0.660
PNO1	ASB3	ENSAPLP00000025611	ENSAPLP00000010018	Partner of NOB1 homolog.	Ankyrin repeat and SOCS box containing 3.	0.669
PNO1	POLR3A	ENSAPLP00000025611	ENSAPLP00000015825	Partner of NOB1 homolog.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.617
PNO1	RPUSD2	ENSAPLP00000025611	ENSAPLP00000004243	Partner of NOB1 homolog.	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	0.689
PNO1	U3IRC4_ANAPP	ENSAPLP00000025611	ENSAPLP00000009797	Partner of NOB1 homolog.	Uncharacterized protein.	0.687
POLR3A	ASB3	ENSAPLP00000015825	ENSAPLP00000010018	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Ankyrin repeat and SOCS box containing 3.	0.572
POLR3A	PNO1	ENSAPLP00000015825	ENSAPLP00000025611	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Partner of NOB1 homolog.	0.617