STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMPOThymopoietin. (446 aa)    
Predicted Functional Partners:
HABP4
Hyaluronan binding protein 4.
    
 0.618
KMT2D
Lysine methyltransferase 2D.
    
 0.573
PIMREG
Uncharacterized protein.
      
 0.555
CCNC
Cyclin C; Belongs to the cyclin family.
   
 0.454
ANLN
Anillin actin binding protein.
   
  
 0.440
LBR
Lamin B receptor.
      
 0.430
RHOBTB1
Uncharacterized protein.
    
 0.412
PSMA4
Proteasome subunit alpha type.
    
 0.412
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.