STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GIN1Gypsy retrotransposon integrase 1. (526 aa)    
Predicted Functional Partners:
EFCAB2
EF-hand calcium binding domain 2.
   
 
 0.921
HARBI1
Harbinger transposase derived 1.
      
 0.749
FANCM
FA complementation group M.
    
 0.710
GALNT2
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.635
PTGR2
Uncharacterized protein.
    
 
 0.617
QRICH1
Glutamine rich 1.
      
 0.611
CTSE
Cathepsin E; Belongs to the peptidase A1 family.
      
 0.611
PGBD5
PiggyBac transposable element derived 5.
   
 
 0.594
CNBP
Uncharacterized protein.
    
 
 0.586
CGGBP1
CGG triplet repeat binding protein 1.
    
 0.508
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.