STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMSYEMSY transcriptional repressor, BRCA2 interacting. (1332 aa)    
Predicted Functional Partners:
PHF12
PHD finger protein 12.
   
 
 0.781
MORF4L1
Mortality factor 4 like 1.
   
 
 0.738
SH3TC1
SH3 domain and tetratricopeptide repeats 1.
      
 0.705
SIN3B
SIN3 transcription regulator family member B.
    
 
 0.679
SIN3A
SIN3 transcription regulator family member A.
    
 
 0.679
KDM5A
Lysine demethylase 5A.
   
 
 0.663
BRCA2
BRCA2 DNA repair associated.
    
 
 0.634
GATAD1
GATA zinc finger domain containing 1.
    
 
 0.632
CBX1
Chromobox 1.
    
 
 0.622
CBX5
Chromobox 5.
    
 
 0.622
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.