STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBMX2RNA binding motif protein X-linked 2. (310 aa)    
Predicted Functional Partners:
PHF5A
PHD finger protein 5A.
    
 0.983
SF3B1
Splicing factor 3b subunit 1.
    
 0.981
SF3B3
Splicing factor 3b subunit 3.
    
 0.977
SF3B4
Splicing factor 3b subunit 4.
    
 0.975
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.972
CDC5L
Cell division cycle 5 like.
    
 
 0.968
PRPF19
Pre-mRNA processing factor 19.
    
   0.948
SF3A2
Splicing factor 3a subunit 2.
    
 0.942
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.933
CWC27
CWC27 spliceosome associated cyclophilin.
   
 0.919
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.