STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPIFCBPI fold containing family C. (459 aa)    
Predicted Functional Partners:
IQCD
IQ motif containing D.
      
 0.651
GYG2
Glycogenin 2.
      
 0.599
LY96
Lymphocyte antigen 96.
     
 0.481
MCM2
DNA helicase; Belongs to the MCM family.
      
 0.477
MCM8
MCM domain-containing protein; Belongs to the MCM family.
      
 0.464
CDT1
Chromatin licensing and DNA replication factor 1.
      
 0.452
CDC45
Cell division cycle 45.
      
 0.452
POLE
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
      
 0.450
DNA2
DNA replication helicase/nuclease 2.
      
 0.450
YWHAG
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma; Belongs to the 14-3-3 family.
      
 0.432
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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