Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BPIFCBPI fold containing family C. (459 aa)    
Predicted Functional Partners:
IQCD
IQ motif containing D.
      
 0.618
LY96
Lymphocyte antigen 96.
     
 0.577
TLR4
Toll like receptor 4.
   
 
 0.577
MCM8
MCM domain-containing protein; Belongs to the MCM family.
      
 0.569
GYG2
Glycogenin 2.
      
 0.527
CDT1
Chromatin licensing and DNA replication factor 1.
      
 0.509
CDC45
Cell division cycle 45.
      
 0.509
POLE
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
      
 0.501
DNA2
DNA replication helicase/nuclease 2.
      
 0.450
SERPINA10
Serpin family A member 10; Belongs to the serpin family.
   
 
 0.436
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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