Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LARP1BLa ribonucleoprotein domain family member 1B. (751 aa)    
Predicted Functional Partners:
LARP1
La ribonucleoprotein domain family member 1.
   
   0.942
DKC1
DKCLD domain-containing protein.
   
 
 0.694
KIF2A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
   0.689
DHX15
DEAH-box helicase 15.
   
 
 0.676
RPS3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.649
PACC1
Proton activated chloride channel 1.
      
 0.623
EDRF1
Erythroid differentiation regulatory factor 1.
      
 0.621
RRP12
Ribosomal RNA processing 12 homolog.
   
  
 0.603
JADE1
Jade family PHD finger 1.
      
 0.602
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.594
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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