STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBLN1Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes. (873 aa)    
Predicted Functional Partners:
FBLN2
Fibulin 2.
   
0.972
NUDCD1
NudC domain containing 1.
    
   0.756
NID1
Nidogen 1.
   
 
0.700
ADAMTS20
ADAM metallopeptidase with thrombospondin type 1 motif 20.
    
 0.632
NID2
Nidogen 2.
   
 
 0.625
APP
Amyloid beta precursor protein.
    
 0.620
ACAN
Aggrecan.
    
 0.614
MFAP5
Microfibril associated protein 5.
   
 
 0.606
DCN
Decorin; May affect the rate of fibrils formation.
   
 0.602
MANBA
Mannosidase beta.
      
 0.550
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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