STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX18SRY-box transcription factor 18. (419 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.901
U3I3F9_ANAPP
POU domain protein.
    
 0.847
U3J2G2_ANAPP
Homeobox domain-containing protein.
    
 0.822
TFAP2C
Transcription factor AP-2 gamma.
   
 0.821
MIXL1
Mix paired-like homeobox.
   
 0.810
GATA6
GATA binding protein 6.
   
 0.800
PRDM1
PR/SET domain 1.
    
 0.799
CXCR4
C-X-C motif chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family.
   
 
 0.750
EOMES
Eomesodermin.
    
 0.739
PAX6
Paired box 6.
   
 0.678
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.