STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR82WD repeat domain 82. (313 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.996
WDR33
WD_REPEATS_REGION domain-containing protein.
   
0.992
CPSF3
Uncharacterized protein.
   
 0.986
CPSF4
Cleavage and polyadenylation specific factor 4.
   
 0.985
U3ILW1_ANAPP
Fip1 domain-containing protein.
   
 0.984
SSU72
Uncharacterized protein.
   
 0.964
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.961
RBBP6
RB binding protein 6, ubiquitin ligase.
    
 
 0.955
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.949
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
   
 0.945
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.