STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
URODUroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. (366 aa)    
Predicted Functional Partners:
CPOX
Uncharacterized protein.
  
 0.998
UROS
Uroporphyrinogen III synthase.
  
 
 0.998
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
  
 0.988
HMBS
Hydroxymethylbilane synthase.
 0.965
ALAD
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
 
 0.955
ENSAPLP00000017013
Uncharacterized protein.
  
 
 0.914
ENSAPLP00000025755
Uncharacterized protein.
  
 
 0.819
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
      
 0.812
ALAS1
5-aminolevulinate synthase.
     
 0.778
U3IWF3_ANAPP
Flavodoxin-like domain-containing protein.
    
  0.760
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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