Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
U3IRV1_ANAPPUncharacterized protein. (1243 aa)    
Predicted Functional Partners:
FYCO1
GOLD domain-containing protein.
 
     0.917
SASS6
SAS-6 centriolar assembly protein.
    
 
 0.797
SCAMP1
Secretory carrier-associated membrane protein.
      
 0.584
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
   
 
 0.561
MAP1LC3B
Uncharacterized protein.
   
 
 0.561
STARD3NL
STARD3 N-terminal like.
      
 0.545
ENSAPLP00000028308
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
      
 0.545
CXCR6
C-X-C motif chemokine receptor 6; Belongs to the G-protein coupled receptor 1 family.
      
 0.544
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
    
 0.488
ZFYVE27
Zinc finger FYVE-type containing 27.
      
 0.485
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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