STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PACRGParkin coregulated. (254 aa)    
Predicted Functional Partners:
MEIG1
Meiosis/spermiogenesis associated 1.
    
 
 0.882
ENSAPLP00000016618
WD_REPEATS_REGION domain-containing protein.
    
 
 0.860
WDR90
Uncharacterized protein.
    
 
 0.860
EFHC1
EF-hand domain containing 1.
  
 
 0.809
EFHC2
EF-hand domain containing 2.
  
 
 0.805
ENKUR
Enkurin, TRPC channel interacting protein.
   
 
 0.781
EFHB
Uncharacterized protein.
   
   0.757
CFAP52
Cilia and flagella associated protein 52.
   
 
 0.707
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.702
WDR27
Uncharacterized protein.
    
 
 0.697
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.